MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4058_ses-1_T1w.
  • Date and time: 2022-09-28, 14:03.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4963082053419605
cnr2.5725308011015056
efc0.5120399725898368
fber1808.3136959185597
fwhmavg4.20385
fwhmx4.14654
fwhmy4.72848
fwhmz3.73653
icvscsf0.18949923718791203
icvsgm0.42012070335108953
icvswm0.39038005946099846
inumed1.9271451234817505
inurange0.7445301711559291
qi10.0017756161052216951
qi20.002538833268326619
rpvecsf30.715075115634665
rpvegm14.659816901753072
rpvewm18.736274843318636
sizex176
sizey256
sizez256
snrcsf2.117966907292167
snrgm10.171895719390468
snrtotal11.503443477914226
snrwm22.220467807060043
snrdcsf40.83151856597264
snrdgm85.9965892258087
snrdtotal79.42519806618157
snrdwm111.44748640676335
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk135.32984732726334
summarybgmad5.878431199097904
summarybgmean14.917809462277688
summarybgmedian13.077351212501526
summarybgn2687207.0
summarybgp053.7562604546546936
summarybgp9528.658876061439514
summarybgstdv10.037847715079584
summarycsfk52.935465010794836
summarycsfmad104.57419712079431
summarycsfmean404.8659496821622
summarycsfmedian366.37451508641243
summarycsfn21201.0
summarycsfp05249.0261560678482
summarycsfp95614.6355069875717
summarycsfstdv172.97998057586233
summarygmk-0.07620549983535385
summarygmmad73.5319551746808
summarygmmean780.4247857788826
summarygmmedian771.6332819163799
summarygmn15321.0
summarygmp05668.196998655796
summarygmp95918.6143622994423
summarygmstdv75.8568629271784
summarywmk0.7988075445459066
summarywmmad39.80832355880335
summarywmmean999.7799891646309
summarywmmedian1000.0000054836273
summarywmn191851.0
summarywmp05923.2749076783657
summarywmp951073.3166447281837
summarywmstdv45.0034359300623
tpmoverlapcsf0.16171756386756897
tpmoverlapgm0.45024919509887695
tpmoverlapwm0.4954030215740204
wm2max0.5484755205695669
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime16:21:44.095000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0683488, 0.965797, 0.250128, -0.0420499, 0.253281, -0.966479]
ImageOrientationTextSag>Tra(3.3)>Cor(3.2)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0288047
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2607, 5456, -7490, 185, 1, -811, 141, -175]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp238.31
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum56d4bf0fedf52f4ec67ac158a74333ad
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.